PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca34636.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family NAC
Protein Properties Length: 344aa    MW: 39484.9 Da    PI: 5.2416
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca34636.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.32.2e-1791493128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpk......kvka...eekewyfFskrdkk.yatgkrknr.atksgyWkatgkd 89 
                 +Gf F+Pt ++lv ++L  +++g++l+     + ++++y  +P+++ +      +v+    +++ +yfF++  ++ ++++kr nr + ++g+W a+ + 
  Dca34636.1   9 VGFVFEPTIQQLVGYFLMTRLNGQQLPSCYPqFFDFNVYCDHPSNIFSsinnvrEVHDedeDDDGYYFFTQLTRRnNPKSKRFNRvVKDHGTWLAKSEI 107
                 7************************77755459999**********64356666222233244478999987655156899****66669********* PP

         NAM  90 kevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                  +v+++ g+l+g  k   f    k+++   ++ +W m ey+l
  Dca34636.1 108 IQVYDSVGNLIGFEKYYKFVpinKKKKDPLNEDEWQMYEYTL 149
                 *******************98765555556799*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.89E-195165IPR003441NAC domain
PROSITE profilePS5100524.0447165IPR003441NAC domain
PfamPF023651.6E-109149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MIMEVYRQVG FVFEPTIQQL VGYFLMTRLN GQQLPSCYPQ FFDFNVYCDH PSNIFSSINN  60
VREVHDEDED DDGYYFFTQL TRRNNPKSKR FNRVVKDHGT WLAKSEIIQV YDSVGNLIGF  120
EKYYKFVPIN KKKKDPLNED EWQMYEYTLN DVKCQDFVLC HITRKLSPAI KQRRLLAKKS  180
RLISPIIVSQ NQNNSQENLS KTTCVEDSIN LDPFDLTFKS LLTECGGVNI NNNNDNNNNN  240
NNNLSNEGQI DIDFYLEQET MPEGDQGSIY EQSVSNNGNG VQGGFQAVFG GSYNEYNSNN  300
VGQLIPRDDY GHVHVHGGVQ GARDRFKSLE KQGLIVPTAN STRN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.15e-08vascular related NAC-domain protein 7